96 
Fishery Bulletin 108(1) 
Avise, J. C., B. W. Bowen, and T. Lamb. 
1989. DNA fingerprints from hypervariable mitochondrial 
genotypes. Mol. Biol. Evol. 6:258-269. 
Bandelt, H , P. Forster, and A. Rohl. 
1999. Median-joining networks for inferring intraspecific 
phylogenies. Mol. Biol. Evol. 16:37-48. 
Bigelow, H. B., M. G. Bradbury, J. R. Dymond, J. R. Greeley, 
S. F. Hildebrand, G. W. Mead, R. R. Miller, L. R. Rivas, W. C. 
Schroeder, R. D. Suttkus, and V. D. Vladykov. 
1963. Genus Brevoortia Gill 1861: Menhaden. In Fishes 
of the western North Atlantic (H. B. Bigelow, ed.), p. 
343-380. Sears Foundation Mar. Res., Yale Univ., New 
Haven, CT. 
Bowen, B. W., and J. C. Avise. 
1990. Genetic structure of Atlantic and Gulf of Mexico 
populations of sea bass, menhaden, and sturgeon: 
influence of zoogeographic factors and life-history 
patterns. Mar. Biol. 107:371-381. 
Brendtro K. S., J. R. McDowell, and J. E. Graves. 
2008. Population genetic structure of escolar ( Lepidocy - 
bium flavobrunneum). Mar. Biol 155:11—22. 
Brown, B. L., T. P. Gunter, J. M. Waters, and J. M. Epifanio. 
2000. Evaluating genetic diversity associated with propa- 
gation-assisted restoration of American shad. Conserv. 
Biol. 14:294-303. 
Checkley, D. M., S. Raman, G. L. Mailet, and K. M. Mason. 
1988. Winter storm effects on the spawning and larval 
drift of a pelagic fish. Nature 335:346-348. 
Dahlberg, M. D. 
1970. Atlantic and Gulf of Mexico menhadens, Genus 
Brevoortia (Pisces: Clupeidae). Bull. Fla. Mus. Nat. 
Hist. Biol. Sci. 15:91-162. 
Dieringer, D., and C. Schlotterer. 
2003. Microsatellite analyzer (MSA): a platform indepen- 
dent analysis tool for large microsatellite data sets. Mol. 
Ecol. Notes 3:167-169. 
Dryfoos, R. L., R. P. Cheek, and R. L. Kroger. 
1973. Preliminary analyses of Atlantic menhaden, 
Brevoortia tyrannus, migrations, population structure, 
survival and exploitation rates, and availability as indi- 
cated from tag returns. Fish. Bull. 71:719-734. 
Echelle, A. F., A. A. Echelle, L. R. Williams, C. S. Toepfer, and 
W. L. Fischer. 
1999. Allozyme perspective on genetic variation in a 
threatened percid fish, the leopard darter (Percina 
pantherina). Am. Midi. Nat. 142:393-400. 
Epperly, S. P. 
1989. A meristic, morphometric and biochemical inves- 
tigation of Atlantic menhaden, Brevoortia tryannus 
(Latrobe). J. Fish Biol. 35:139-152. 
Excoffier, L., G. Laval, and S. Schneider. 
2005. Arlequin (vers. 3.0): an integrated software package 
for population genetics data analysis. Evol. Bioinfor- 
matics Online 1:47-50. 
Faria R., S. Wallner, S. Weiss, and P. Alexandrino. 
2004. Isolation and characterization of eight dinucleo- 
tide microsatellite loci from two closely related clupeid 
species ( Alosa alosa and A. fallax). Mol. Ecol. Notes 
4:586-588. 
Gonzalez E. G., and R. Zardoya. 
2007. Isolation and characterization of polymorphic mic- 
rosatellites for the sardine Sardina pilchardus (Clupe- 
iformes: Clupeidae). Mol. Ecol. Notes 7:519-921. 
Goudet, J. 
1995. FSTAT (vers. 1.2): A computer program to calculate 
F-statistics. J. Hered. 86:485—486. 
Grant W. S. 
1984. Biochemical population genetics of Atlantic her- 
ring, Clupea harengus. Copeia 1984:357-364. 
Grant W. S., and G. Stahl. 
1988. Description of electrophoretic loci in Atlantic cod, 
Gadus morhua, and comparison with Pacific cod, Gadus 
macrocephalus. Hereditas 108:27-36. 
Grant W. S., F. M. Utter. 
1984. Biochemical population genetics of Pacific herring 
(Clupea pallasi). Can. J. Fish. Aquat. Sci. 41:856- 
864. 
Gray, K. N., J. R. McDowell, B. B. Collette, and J. E. Graves. 
2008. An investigation of the global stock structure 
of the marlinsucker (Remora osteochir) inferred from 
mitochondrial control region sequence data. Bull. Mar. 
Sci. 84:25-42. 
Guo, S. W., and E. A. Thompson. 
1992. Performing the exact test for Hardy-Weinberg 
proportion for multiple alleles. Biometrics 48:361- 
372. 
Hubert, N., R. Hanner, E. Holm, N. E. Mandrak, E. Taylor, 
M. Burridge, D. Watkinson, A. Curry, P. Bentzen, J. Zhang, 
J. April, and L. Bernatchez. 
2008. Identifying Canadian freshwater fishes through 
DNA barcodes. PLoSONE 3(6):e2490. 
Julian, S. E., and M. L. Bartron. 
2007. Microsatellite DNA markers for American shad 
( Alosa sapidissima) and cross-species amplification 
within the family Clupeidae. Mol. Ecol. Notes 1:1-3. 
June, F. C., and W. R. Nicholson. 
1964. Age and size composition of the menhaden catch 
along the Atlantic coast of the United States, 1958. 
U.S. Fish Wildl. Serv. Spec. Sci. Rep. Fish. 446:1-25. 
Kendall, A. W., Jr., and J. W. Reintjes. 
1975. Geographic and hydrographic distribution of Atlan- 
tic menhaden eggs and larvae along the middle Atlantic 
coast from RV Dolphin Cruises, 1965-66. Fish. Bull. 
73:317-330. 
Lynch, A. J. 
2008. A molecular analysis of Atlantic menhaden 
(Brevoortia tyrannus) stock structure. M.S. thesis, 
120 p. Virginia Inst. Mar. Sci., College of William 
and Mary, Gloucester Point, VA. 
McPherson, A. A., P. T. O’Reilly, T. L. McParland, W. M. Jones, 
and P. Bentzen. 
2001. Isolation of nine novel tetranucleotide microsatel- 
lites in Atlantic herring (Clupea harengus). Mol. Ecol. 
Notes 1:31-32. 
Meyer, A. 
1993. Evolution of mitochondrial DNA in fishes. In 
Biochem. Mol. Biol. Fishes, vol. 2 (P. W. Hochachka, and 
T. P. Mommsen, eds.), p. 1-38. Elsevier Sci., Amster- 
dam, Netherlands. 
Nicholson, W. R. 
1978. Movements and population structure of Atlan- 
tic menhaden indicated by tag returns. Estuaries 
1:141-150. 
O’Connell M., M. C. Dillon, and J. M. Wright. 
1998. Development of primers for polymorthic mic- 
rosatellite loci in Pacific herring (Clupea harengus 
pallasi). Mol. Ecol. 7:357—363. 
Olsen, J. B., C. J. Lewis, E. J. Kretschmer, S. L. Wilson, and 
J. E. Seeb. 
2002. Characterization of 14 tetranucleotide microsatel- 
lite loci derived from Pacific herring. Mol. Ecol. Notes 
2:101-103. 
