390 
Fishery Bulletin 109(4) 
Appendix 
Statistical data on Gulf of Alaska Pacific herring ( Clupea pallasii) by loci, including name of locus, GENEBANK accession 
number, allele size range and number of base pair (bp) repeats. Collection: l=Berners Bay 07, 2=Berners Bay 08, 3=Berners 
Bay 09, 4=Lynn Canal 07, 5=Lynn Canal 08a, 6=Lynn Canal 08b, 7=Hobart Bay 07, 8=Hoonah Sound 08, 9 = Sitka Sound 07, 
10 = Sitka Sound 08, ll=Nichols Bay 08, 12=west Prince William Sound, and 13=east Prince William Sound. Collection sizes in), 
number of alleles (rc a ), allele richness (a), observed heterozygosity (H 0 ), expected heterozygosity (H e ), effective number of alleles 
(n eff ), and estimated inbreeding coefficient (F is ). Total is n across all populations. All other values in the total column are an 
average across all collections. 
Cha63 
Collection 
AF019987, allele size range 130- 
187, 2 bp repeats 
1 
2 
3 
4 
5 
6 
7 
8 
9 
10 
11 
12 
13 
Total 
n 
49 
126 
136 
98 
95 
97 
128 100 
72 
131 
97 
99 
92 
1320 
n a 
19 
24 
23 
21 
24 
24 
24 
24 
21 
25 
23 
21 
23 
30 
a 
17.77 
19.22 
17.29 
17.22 
18.08 
19.31 
18.69 
18.88 
18.14 
18.88 
18.29 
17.91 
19.69 
18.42 
H 0 
0.94 
0.92 
0.94 
0.86 
0.86 
0.91 
0.92 
0.91 
0.88 
0.95 
0.84 
0.92 
0.97 
0.91 
H e 
0.92 
0.91 
0.91 
0.88 
0.90 
0.91 
0.91 
0.92 
0.91 
0.92 
0.89 
0.92 
0.93 
0.91 
n eff 
12.50 
11.11 
11.11 
8.33 
10.00 
11.11 
11.11 
12.50 
11.11 
12.50 
9.09 
12.50 
14.29 
11.33 
F is 
-0.023 
-0.009 
-0.040 
0.029 
0.036 
-0.002 
-0.003 
0.009 
0.041 
-0.029 
-0.029 
0.064 
-0.004 -0.038 
ChalOn 
Collection 
AF289096, allele size range 158- 
208, 4 bp repeats 
1 
2 
3 
4 
5 
6 
7 
8 
9 
10 
11 
12 
13 
Total 
n 
52 
126 
148 
98 
96 
96 
128 100 
75 
131 
97 
99 
91 
1337 
«a 
6 
6 
7 
5 
6 
6 
6 
5 
6 
5 
5 
6 
6 
7 
a 
5.49 
5.31 
5.63 
4.93 
5.45 
5.52 
4.84 
4.74 
5.24 
4.87 
4.76 
5.24 
5.22 
5.16 
H 0 
0.58 
0.57 
0.57 
0.48 
0.54 
0.52 
0.49 
0.54 
0.49 
0.53 
0.49 
0.47 
0.45 
0.52 
0.56 
0.55 
0.58 
0.54 
0.58 
0.55 
0.55 
0.58 
0.60 
0.54 
0.53 
0.50 
0.54 
0.55 
,l eff 
2.27 
2.22 
2.38 
2.17 
2.38 
2.22 
2.22 
2.38 
2.50 
2.17 
2.13 
2.00 
2.17 
2.25 
F is 
-0.023 
-0.031 
0.015 
0.109 
0.065 
0.060 
0.101 
0.063 
0.174 
0.005 
0.005 
0.076 
0.046 0.167 
Chal020 
Collection 
AF289095, allele size range 130- 
239, 2 bp repeats 
1 
2 
3 
4 
5 
6 
7 
8 
9 
10 
11 
12 
13 
Total 
rt 
52 
113 
148 
91 
95 
98 
123 
99 
70 
117 
93 
98 
49 
1246 
,l a 
17 
28 
33 
28 
27 
26 
30 
22 
23 
28 
23 
28 
18 
43 
a 
15.29 
18.57 
19.03 
17.98 
18.36 
18.05 
18.38 
15.63 
17.16 
17.74 
15.25 
19.15 
16.37 
17.80 
H 0 
0.73 
0.84 
0.83 
0.85 
0.88 
0.82 
0.84 
0.86 
0.87 
0.80 
0.75 
0.88 
0.90 
0.83 
He 
0.79 
0.83 
0.81 
0.81 
0.84 
0.85 
0.83 
0.82 
0.83 
0.81 
0.79 
0.85 
0.84 
0.82 
n ef{ 
4.76 
5.88 
5.26 
5.26 
6.25 
6.67 
5.88 
5.56 
5.88 
5.26 
4.76 
6.67 
6.25 
5.72 
F is 
0.074 
-0.016 
-0.023 
-0.041 
-0.054 
0.035 
-0.011 
-0.049 
-0.050 
0.012 
0.012 
0.048 
-0.035 
-0.074 
Cpa4 
Collection 
AF309800, allele 
size range 111- 
195, 4 bp repeats 
1 
2 
3 
4 
5 
6 
7 
8 
9 
10 
11 
12 
13 
Total 
n 
51 
125 
144 
94 
96 
95 
128 
98 
73 
129 
92 
97 
87 
1309 
"a 
15 
16 
18 
17 
18 
17 
17 
18 
17 
18 
16 
18 
16 
22 
a 
13.99 
13.66 
14.37 
14.58 
14.26 
14.53 
14.15 
14.57 
14.62 
15.33 
14.65 
15.23 
14.25 
14.48 
H 0 
0.90 
0.88 
0.92 
0.95 
0.91 
0.88 
0.91 
0.87 
0.95 
0.89 
0.90 
0.96 
0.94 
0.91 
He 
0.91 
0.89 
0.90 
0.91 
0.90 
0.90 
0.91 
0.90 
0.90 
0.92 
0.92 
0.91 
0.91 
0.90 
«eff 
11.11 
9.09 
10.00 
11.11 
10.00 
10.00 
11.11 
9.80 
9.62 
12.20 
12.50 
11.11 
11.11 
10.67 
Fis 
0.009 
0.016 
-0.021 
-0.044 
-0.00S 
0.018 
-0.008 
0.035 
-0.055 
0.029 
0.029 
0.016 
-0.052 
0.001 
continued 
